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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1021104_1021519_R


Intron Information:

Intron Rank:
19

Intron Class:
minor

Intron Phase:
0

Intron Coordinates:
1021104 - 1021519

Intron Length:
416

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTATCCTTC

5'SS Class:
strong_minor

3'SS Sequence:
CCATCTCTCCCAG|T

3'SS Class:
minor_BPS

U2 Branch Point Sequence:
CCCTTAA

U12 Branch Point Sequence:
TTTCCCTTAAGC

Flanking Amino Acid:
AEDRFAIVMTSFLESAQPAM

Intron Amino Acid Position:
905

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
49.2
-0
1.3
50.1
41.8

Major BPS
57.3
0.18
1.1
49.2
36.2

Major PPT
73.5
0.53
0.8
64.9
36.1

Minor 5ss
95.2
1.52
0.7
94.3
17.7

Minor BPS
75.9
0.79
1.6
84.23
34.9

Associated Gene:

Gene:
GRID2IP

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1020571 - 1045061
24491

1020571 - 1046770
26200