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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1021639_1022532_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1021639 - 1022532

Intron Length:
894

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATCGAA

5'SS Class:
major

3'SS Sequence:
CTCTGCTCTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGGTAAT

U12 Branch Point Sequence:
ACCCAGGTAATG

Flanking Amino Acid:
DLPTVPLAAKVNQRTLTADL

Intron Amino Acid Position:
865

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.3
0.69
1
70.4
35.6

Major BPS
60.4
0.26
1.3
61.4
43.2

Major PPT
79.1
0.65
0.8
72.8
32

Minor 5ss
35.7
-1.6
3.3
46.7
48.6

Minor BPS
34.7
-1.3
2.4
35.34
40.2

Associated Gene:

Gene:
GRID2IP

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1020571 - 1046770
26200

1020571 - 1045061
24491