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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1023173_1023843_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1023173 - 1023843

Intron Length:
671

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTCAGAACT

5'SS Class:
major

3'SS Sequence:
TTTGTGTTTGCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CATTCAC

U12 Branch Point Sequence:
TGGTCATTCACC

Flanking Amino Acid:
SSKKLAKILEFVLAMGNYLN

Intron Amino Acid Position:
793

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.2
0.66
1.2
78.1
36.3

Major BPS
69.9
0.5
1
73
31.5

Major PPT
86.1
0.81
0.8
80.6
37

Minor 5ss
31.5
-2.1
2.8
42.1
44.1

Minor BPS
54.6
0.13
2.1
68.37
42.8

Associated Gene:

Gene:
GRID2IP

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1020571 - 1046770
26200

1020571 - 1045061
24491