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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1035731_1038016_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1035731 - 1038016

Intron Length:
2286

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTAACTCGG

5'SS Class:
major

3'SS Sequence:
TCCAATCTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCCAAT

U12 Branch Point Sequence:
TCTTTCCAATCT

Flanking Amino Acid:
CKALESFFQHRNIDTLIVDV

Intron Amino Acid Position:
242

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.2
0.45
1.2
54.9
49.4

Major BPS
71.8
0.54
1.2
79
32.5

Major PPT
75.8
0.58
0.9
68.9
36.6

Minor 5ss
39.6
-1.2
2.9
50.7
45.7

Minor BPS
46.9
-0.1
2.2
71.67
45.4

Associated Gene:

Gene:
GRID2IP

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1020571 - 1046770
26200

1020571 - 1045061
24491