Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_104142_104243_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

104142 - 104243

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCATTTGT

5'SS Class:

major

3'SS Sequence:

TTTATGGGAGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTTTTTTAATG

Flanking Amino Acid:

ISLLPLQNKQIPELKEDISI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.3

71.6

40.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

58.9

0.2

1.1

55.4

44.5

Minor 5ss

37.4

-1.4

2.8

51.2

45.1

Minor BPS

64.7

0.32

1.3

61.64

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020476

101439 - 106123

4685