Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_10576144_10576984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10576144 - 10576984

Intron Length:

841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACATGG

5'SS Class:

major

3'SS Sequence:

CGCTTTTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TGCTACAGAACA

Flanking Amino Acid:

ICEKGLQRRKSFACIWLCEQ

Intron Amino Acid Position:

1573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

63.4

43.8

Major BPS

82.2

0.8

0.9

81.6

Major PPT

80.8

0.69

0.8

72.6

37.6

Minor 5ss

42.9

-0.8

2.9

56.6

47.5

Minor BPS

48.4

-0.1

1.9

63.55

41.9

Associated Gene:

Gene:

KIAA0556

Ensembl Gene ID:

ENSAPLG00000003455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039077

10575143 - 10645149

70007