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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10577037_10578954_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10577037 - 10578954

Intron Length:

1918

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTCCCTTAACA

Flanking Amino Acid:

SKMKQVVADPALRPKTCICE

Intron Amino Acid Position:

1480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

1.1

82.6

30.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

81.2

0.7

0.8

77.3

29.9

Minor 5ss

39.2

-1.2

2.7

51.6

44.8

Minor BPS

89.8

1.24

0.9

93.36

24.6

Associated Gene:

Gene:

KIAA0556

Ensembl Gene ID:

ENSAPLG00000003455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041615

10576047 - 10645149

69103

ENSAPLT00000039077

10575143 - 10645149

70007

ENSAPLT00000003548

10576981 - 10652516

75536