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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10618785_10622644_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10618785 - 10622644

Intron Length:

3860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

TATATGTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

GATTGTATATGT

Flanking Amino Acid:

LCCLVNQNLNTTKECFLWMC

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

62.5

43.5

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

76.6

0.6

0.9

73.9

41.2

Minor 5ss

32.5

-2

3.4

44.3

Minor BPS

39.8

-0.6

2.3

58.43

44.5

Associated Gene:

Gene:

KIAA0556

Ensembl Gene ID:

ENSAPLG00000003455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039077

10575143 - 10645149

70007

ENSAPLT00000003548

10576981 - 10652516

75536

ENSAPLT00000003542

10578730 - 10645149

66420

ENSAPLT00000041615

10576047 - 10645149

69103