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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10699241_10699540_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10699241 - 10699540

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TGGAGACCAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTTTGAGCAATG

Flanking Amino Acid:

GFSQHETVDSDAHGRELQDF

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

46.7

-0.1

1.1

38.5

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

40.3

-0.8

2.6

56.49

45.2

Associated Gene:

Gene:

RHBDF1

Ensembl Gene ID:

ENSAPLG00000004575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004755

10693507 - 10712874

19368