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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10705855_10710453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10705855 - 10710453

Intron Length:

4599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATAC

5'SS Class:

strong_major

3'SS Sequence:

TGACATCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

GTATGCTGACAT

Flanking Amino Acid:

RQTSITQTIKRGTADWFGVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

77.3

26.4

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

74.2

0.54

0.9

69.9

40.9

Minor 5ss

32.8

-2

40.8

45.7

Minor BPS

44.4

-0.3

2.2

64.06

45.4

Associated Gene:

Gene:

RHBDF1

Ensembl Gene ID:

ENSAPLG00000004575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034691

10705623 - 10714500

8878

ENSAPLT00000004755

10693507 - 10712874

19368