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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10710585_10712754_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10710585 - 10712754

Intron Length:

2170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAGG

5'SS Class:

major

3'SS Sequence:

CTTTTCTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CTTTTCTTCACA

Flanking Amino Acid:

AVPEEPLPVQPTRRQAFLRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

57.8

46.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

87.9

0.85

0.7

83.3

25.1

Minor 5ss

29.9

-2.3

3.3

39.8

45.8

Minor BPS

68.5

0.58

1.7

78.35

38.8

Associated Gene:

Gene:

RHBDF1

Ensembl Gene ID:

ENSAPLG00000004575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034691

10705623 - 10714500

8878

ENSAPLT00000004755

10693507 - 10712874

19368