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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10712897_10714440_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10712897 - 10714440

Intron Length:

1544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

CCTTCCCAAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.8

42.2

Major BPS

75.8

0.64

65.8

Major PPT

76.1

0.59

0.7

69.2

31.4

Minor 5ss

42.6

-0.8

3.1

56.9

41.9

Minor BPS

49.6

-0

63.3

43.7

Associated Gene:

Gene:

RHBDF1

Ensembl Gene ID:

ENSAPLG00000004575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034691

10705623 - 10714500

8878