Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_10758047_10761194_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10758047 - 10761194

Intron Length:

3148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

ACCTCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TGCCCTCTGACC

Flanking Amino Acid:

ISLAKSFLGQILVRRLPDGR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

0.58

0.9

72.6

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

49.6

-0

1.7

60.81

38.5

Associated Gene:

Gene:

MPG

Ensembl Gene ID:

ENSAPLG00000005267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005440

10756522 - 10767799

11278