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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1083794_1084510_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1083794 - 1084510

Intron Length:

717

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGA|GCACGCGGG

5'SS Class:

weak_major

3'SS Sequence:

GGGGAATTAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

GGGGAATTAACA

Flanking Amino Acid:

LRRMEPGDRERNYRDSFPQG

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.3

49.4

44.1

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

52.4

0.05

1.1

43.7

45.5

Minor 5ss

25.6

-2.8

4.3

33.1

43.4

Minor BPS

47.1

-0.2

1.9

55.37

42.8

Associated Gene:

Gene:

BRICD5

Ensembl Gene ID:

ENSAPLG00000005735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005925

1083211 - 1085115

1905