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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10851668_10852082_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10851668 - 10852082

Intron Length:

415

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCCTCTGCA

5'SS Class:

weak_major

3'SS Sequence:

GCTTCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTACAA

U12 Branch Point Sequence:

AGCTGTGCAAGT

Flanking Amino Acid:

AMPQTIISPAKVFVPKYTAR

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.07

1.3

56.4

39.6

Major BPS

49.8

-0

1.1

58.8

38.1

Major PPT

79.9

0.67

0.8

73.5

31.5

Minor 5ss

31.4

-2.1

41.1

39.5

Minor BPS

35.5

-1

2.4

50.39

Associated Gene:

Gene:

PGAP6

Ensembl Gene ID:

ENSAPLG00000006045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031240

10851612 - 10863316

11705

ENSAPLT00000006287

10847919 - 10863316

15398