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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10852427_10853658_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10852427 - 10853658

Intron Length:

1232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTGGCTGG

5'SS Class:

weak_major

3'SS Sequence:

AGCACAGGAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGGAC

U12 Branch Point Sequence:

TGGTTCTGGACC

Flanking Amino Acid:

LCLLCLSQAFAGSPTQSTGM

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.2

0.17

1.3

45.4

Major BPS

49.6

-0

1.4

44.3

Major PPT

47.6

-0.1

1.1

35.8

38.7

Minor 5ss

38.4

-1.3

3.1

44.4

45.4

Minor BPS

0.27

1.5

66.71

39.1

Associated Gene:

Gene:

PGAP6

Ensembl Gene ID:

ENSAPLG00000006045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031240

10851612 - 10863316

11705