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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10857726_10858510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10857726 - 10858510

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCTGCTTTCATT

Flanking Amino Acid:

SLQLICTKGQGECNTAEAKV

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.8

43.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

80.3

0.68

0.9

73.9

35.4

Minor 5ss

31.9

-2.1

2.9

41.8

Minor BPS

56.8

0.3

1.9

74.65

43.4

Associated Gene:

Gene:

PGAP6

Ensembl Gene ID:

ENSAPLG00000006045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031240

10851612 - 10863316

11705

ENSAPLT00000006287

10847919 - 10863316

15398