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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10858648_10860742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10858648 - 10860742

Intron Length:

2095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGAGAT

U12 Branch Point Sequence:

AGATCCACACAG

Flanking Amino Acid:

YLYAGCSCKAGWSGWSCTDD

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.9

31.3

Major BPS

55.2

0.13

1.2

52.5

43.3

Major PPT

79.1

0.65

0.8

72.8

Minor 5ss

27.7

-2.6

29.3

Minor BPS

39.5

-0.9

42.66

41.4

Associated Gene:

Gene:

PGAP6

Ensembl Gene ID:

ENSAPLG00000006045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031240

10851612 - 10863316

11705

ENSAPLT00000006287

10847919 - 10863316

15398