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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10862171_10863019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10862171 - 10863019

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCACACCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GTTGCTTTAACC

Flanking Amino Acid:

FALVIMIAAWVYQGVKRRHC

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

77.9

38.6

Major BPS

77.3

0.68

79.3

29.4

Major PPT

65.3

0.35

0.9

55.3

35.3

Minor 5ss

34.6

-1.7

2.7

34.2

41.4

Minor BPS

75.1

0.77

1.3

78.83

36.8

Associated Gene:

Gene:

PGAP6

Ensembl Gene ID:

ENSAPLG00000006045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031240

10851612 - 10863316

11705

ENSAPLT00000006287

10847919 - 10863316

15398