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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1093242_1093325_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1093242 - 1093325

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCTCT

5'SS Class:

major

3'SS Sequence:

ACCCCAAATCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

ACCCCCTGAAAC

Flanking Amino Acid:

SSWIHIGADEVFHLGEGMDS

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

68.4

39.3

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

0.2

48.2

37.9

Minor 5ss

39.6

-1.2

3.3

56.2

48.2

Minor BPS

50.5

-0

1.6

56.68

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033631

1091795 - 1095560

3766

ENSAPLT00000006056

1091793 - 1095560

3768