Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_1094233_1094314_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1094233 - 1094314

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCGCC

5'SS Class:

major

3'SS Sequence:

CCCTGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACCAC

U12 Branch Point Sequence:

GGTGACGGCACG

Flanking Amino Acid:

FQGIVLTGWQRYDHYSVLCE

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

62.1

38.4

Major BPS

49.1

-0

1.3

58.8

37.5

Major PPT

68.2

0.41

0.8

29.2

Minor 5ss

30.8

-2.2

3.5

41.3

45.5

Minor BPS

33.6

-1.4

2.4

38.65

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033631

1091795 - 1095560

3766

ENSAPLT00000006056

1091793 - 1095560

3768