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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10989286_10989460_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10989286 - 10989460

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGCCAC

U12 Branch Point Sequence:

GCCACCTCCAGC

Flanking Amino Acid:

TRVKSSICLEGYIKFNEQYV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

44.9

-0.3

1.4

49.9

45.3

Major PPT

66.5

0.37

62.1

34.8

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

40.1

-0.7

2.1

43.57

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037796

10988570 - 10990941

2372