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Intron Name: Anas_platyrhynchos_platyrhynchos_15_10990442_10994159_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10990442 - 10994159

Intron Length:

3718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTCGGAGCT

5'SS Class:

weak_major

3'SS Sequence:

AGCTCCCTGTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACGTAT

U12 Branch Point Sequence:

TATGGGTCAGGT

Flanking Amino Acid:

PAGLLPALPQCHQCCTAWQE

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.5

0.15

1.3

57.8

37.9

Major BPS

46.4

-0.2

1.5

43.4

41.5

Major PPT

64.8

0.33

62.3

39.2

Minor 5ss

28.8

-2.4

3.5

39.9

39.8

Minor BPS

32.9

-1.2

2.6

52.78

47.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021498

10988726 - 10994216

5491