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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11043912_11044248_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11043912 - 11044248

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CAGCCGCTGACT

Flanking Amino Acid:

ISLSYLTKGSIWADPGKYAL

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

81.7

31.9

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

85.9

0.81

0.7

84.4

23.4

Minor 5ss

33.7

-1.9

3.4

49.9

46.4

Minor BPS

42.8

-0.4

2.3

58.21

44.7

Associated Gene:

Gene:

CLCN7

Ensembl Gene ID:

ENSAPLG00000007385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035294

11041830 - 11054139

12310

ENSAPLT00000007803

11041830 - 11056734

14905