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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11046889_11047441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11046889 - 11047441

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GCGTGCTGACAC

Flanking Amino Acid:

IPIFIFMGVVGGILGALFNA

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

80.7

31.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

82.3

0.73

0.9

76.3

37.7

Minor 5ss

36.5

-1.5

3.6

53.2

Minor BPS

40.1

-0.7

2.1

44.86

43.1

Associated Gene:

Gene:

CLCN7

Ensembl Gene ID:

ENSAPLG00000007385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035294

11041830 - 11054139

12310

ENSAPLT00000007803

11041830 - 11056734

14905