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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11050527_11051261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11050527 - 11051261

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CCGTTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACAAAC

U12 Branch Point Sequence:

TTAGCCACAAAC

Flanking Amino Acid:

VGSVIVAFIEPVAAGSGIPQ

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

33.8

Major BPS

48.9

-0

0.9

54.6

27.1

Major PPT

71.6

0.49

0.8

65.4

30.4

Minor 5ss

26.4

-2.7

3.5

38.5

46.7

Minor BPS

-0.2

62.28

42.3

Associated Gene:

Gene:

CLCN7

Ensembl Gene ID:

ENSAPLG00000007385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035294

11041830 - 11054139

12310

ENSAPLT00000007803

11041830 - 11056734

14905