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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11051372_11051607_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

11051372 - 11051607

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATCCTCA

5'SS Class:

minor

3'SS Sequence:

TCCCCTGCCTCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

CTTTCCTTGATC

Flanking Amino Acid:

AGLKYRVVKDNIDKFTEKGG

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.4

-0

1.2

46.2

38.8

Major BPS

71.5

0.53

1.1

43.2

Major PPT

0.47

0.8

68.3

31.9

Minor 5ss

77.8

0.94

1.5

Minor BPS

79.6

0.92

1.1

81.45

33.4

Associated Gene:

Gene:

CLCN7

Ensembl Gene ID:

ENSAPLG00000007385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035294

11041830 - 11054139

12310

ENSAPLT00000007803

11041830 - 11056734

14905