Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_11051741_11052314_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11051741 - 11052314

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

CTGACACCATTT

Flanking Amino Acid:

LEEERRINHAAFRTVEIKRW

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

72.6

38.9

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

75.6

0.58

0.9

65.9

Minor 5ss

33.8

-1.8

45.5

42.6

Minor BPS

36.2

-0.9

50.84

43.2

Associated Gene:

Gene:

CLCN7

Ensembl Gene ID:

ENSAPLG00000007385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035294

11041830 - 11054139

12310

ENSAPLT00000007803

11041830 - 11056734

14905