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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11059230_11063766_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11059230 - 11063766

Intron Length:

4537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCCTCCC

5'SS Class:

major

3'SS Sequence:

GTCCCTGGGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCGCAT

U12 Branch Point Sequence:

GCTGCAGCATCG

Flanking Amino Acid:

PFLHSVTAQEDAPAGWTWAH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.2

56.9

42.5

Major BPS

61.2

0.28

1.3

71.4

36.6

Major PPT

44.1

-0.3

1.7

45.2

41.3

Minor 5ss

34.5

-1.8

45.5

42.5

Minor BPS

33.2

-1.4

2.3

37.13

44.8

Associated Gene:

Gene:

PTX4

Ensembl Gene ID:

ENSAPLG00000024719

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026754

11057798 - 11063826

6029