Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_11067196_11067335_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11067196 - 11067335

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCACCAT

U12 Branch Point Sequence:

CCACCATCAGCC

Flanking Amino Acid:

LAVLNKWGTDNIVFLGDFNA

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

31.3

Major BPS

46.3

-0.2

1.3

52.4

41.4

Major PPT

73.7

0.53

0.7

68.2

25.4

Minor 5ss

-1.8

2.7

42.8

36.9

Minor BPS

41.5

-0.6

1.9

46.44

41.9

Associated Gene:

Gene:

DNASE1L2

Ensembl Gene ID:

ENSAPLG00000008612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042625

11065946 - 11069255

3310

ENSAPLT00000008951

11066153 - 11069255

3103