Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_11068822_11069108_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11068822 - 11069108

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTACT

5'SS Class:

major

3'SS Sequence:

CCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

GCACCCCGAGCC

Flanking Amino Acid:

DEAVAGVIVNVLRRYDVVLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.2

80.5

33.9

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

0.5

0.8

65.4

30.4

Minor 5ss

34.3

-1.8

2.8

43.1

36.9

Minor BPS

41.7

-0.6

1.9

47.88

40.6

Associated Gene:

Gene:

DNASE1L2

Ensembl Gene ID:

ENSAPLG00000008612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008951

11066153 - 11069255

3103