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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1117891_1117975_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1117891 - 1117975

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

CGTGCGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

ACCCCGCTGACC

Flanking Amino Acid:

AAKNGHIDIIRLLLQAGIDI

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.1

38.4

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

62.5

0.28

0.9

54.1

36.6

Minor 5ss

27.6

-2.6

3.3

35.7

41.2

Minor BPS

-0.6

2.2

50.11

40.6

Associated Gene:

Gene:

CASKIN1

Ensembl Gene ID:

ENSAPLG00000024608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017998

1114638 - 1129507

14870

ENSAPLT00000043102

1114638 - 1130066

15429

ENSAPLT00000024626

1114638 - 1130066

15429