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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1118085_1118310_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1118085 - 1118310

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGGGCC

5'SS Class:

major

3'SS Sequence:

GGTGCCGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

TCATCCCGAGCC

Flanking Amino Acid:

KTDVVRLLLDSGINAHVRNT

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

71.2

34.2

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

66.6

0.37

57.9

43.1

Minor 5ss

32.9

-1.9

3.6

46.8

42.1

Minor BPS

47.2

-0.2

61.31

43.4

Associated Gene:

Gene:

CASKIN1

Ensembl Gene ID:

ENSAPLG00000024608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017998

1114638 - 1129507

14870

ENSAPLT00000043102

1114638 - 1130066

15429

ENSAPLT00000024626

1114638 - 1130066

15429