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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1118420_1118546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1118420 - 1118546

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGGGCA

5'SS Class:

major

3'SS Sequence:

TCTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

CACCCGGTGACG

Flanking Amino Acid:

ASKEIKQMLRDASAALQVRA

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.47

1.1

57.9

38.2

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

75.7

0.58

0.8

69.7

31.1

Minor 5ss

27.7

-2.6

3.6

29.4

43.4

Minor BPS

38.1

-1

2.5

40.33

Associated Gene:

Gene:

CASKIN1

Ensembl Gene ID:

ENSAPLG00000024608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043102

1114638 - 1130066

15429

ENSAPLT00000024626

1114638 - 1130066

15429

ENSAPLT00000017998

1114638 - 1129507

14870