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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1118642_1118721_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1118642 - 1118721

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

GAGCTGCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CTGCCCTGACCC

Flanking Amino Acid:

LNVKAGDVITVLEQHADGHW

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.3

57.1

42.2

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

59.1

0.21

50.7

38.9

Minor 5ss

29.4

-2.4

3.1

37.2

40.3

Minor BPS

49.6

-0

1.8

60.56

44.4

Associated Gene:

Gene:

CASKIN1

Ensembl Gene ID:

ENSAPLG00000024608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017998

1114638 - 1129507

14870

ENSAPLT00000043102

1114638 - 1130066

15429

ENSAPLT00000024626

1114638 - 1130066

15429