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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11187422_11187703_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11187422 - 11187703

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCGTTAT

U12 Branch Point Sequence:

AGCCCGTTATCT

Flanking Amino Acid:

TDGSGPYVPPAGYYPPPGPH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

56.4

0.16

1.3

44.8

Major PPT

83.7

0.76

0.7

76.5

32.1

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

46.5

-0.1

2.3

64.56

45.5

Associated Gene:

Gene:

CDIP1

Ensembl Gene ID:

ENSAPLG00000029972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043215

11186165 - 11189793

3629