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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1118840_1122522_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1118840 - 1122522

Intron Length:

3683

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAATACT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCACCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

TGCTCTGCCACC

Flanking Amino Acid:

SLVEAISKRTGSRGADMSPS

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.91

88.3

26.2

Major BPS

51.1

0.03

1.2

39.9

Major PPT

55.4

0.12

1.1

52.7

36.1

Minor 5ss

27.4

-2.6

3.8

43.2

43.8

Minor BPS

41.3

-0.7

2.4

54.58

43.9

Associated Gene:

Gene:

CASKIN1

Ensembl Gene ID:

ENSAPLG00000024608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043102

1114638 - 1130066

15429