Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_11193575_11195332_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11193575 - 11195332

Intron Length:

1758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAA

U12 Branch Point Sequence:

GTGGAGTGAAAG

Flanking Amino Acid:

RYEEMEDDNVSPTDLSELLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.9

30.1

Major BPS

48.6

-0

1.3

41.1

41.4

Major PPT

76.3

0.59

0.9

69.6

36.8

Minor 5ss

-2.1

2.8

42.5

44.3

Minor BPS

36.6

-1.1

2.2

39.26

43.5

Associated Gene:

Gene:

HMOX2

Ensembl Gene ID:

ENSAPLG00000002475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002492

11191013 - 11195415

4403