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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11198512_11199848_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11198512 - 11199848

Intron Length:

1337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAAGCCT

5'SS Class:

weak_major

3'SS Sequence:

TCAGAGGGAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

ATTTCCACCAGC

Flanking Amino Acid:

ACVSSGTSPGRGEKLFPCYQ

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.7

0.23

1.1

43.1

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

-0.3

1.2

39.5

Minor 5ss

-1.8

3.5

44.9

43.8

Minor BPS

43.5

-0.5

2.4

62.05

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022350

11198453 - 11202285

3833