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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11213244_11213488_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11213244 - 11213488

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGCATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAGAC

U12 Branch Point Sequence:

TTACCTTAGACT

Flanking Amino Acid:

ETPQLKKELKRFGVRALPKR

Intron Amino Acid Position:

1608

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.1

36.1

Major BPS

56.9

0.17

1.1

56.1

39.6

Major PPT

90.4

0.91

0.6

88.5

Minor 5ss

41.7

-0.9

2.9

58.2

46.1

Minor BPS

58.7

0.35

1.7

77.23

39.4

Associated Gene:

Gene:

SLX4

Ensembl Gene ID:

ENSAPLG00000029433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018192

11211360 - 11236738

25379