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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1123992_1125685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1123992 - 1125685

Intron Length:

1694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCCTCCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CCCCGCTGACCA

Flanking Amino Acid:

GPAKAQDIPAGSSRSQSVAS

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.5

35.4

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

63.2

0.3

57.9

33.2

Minor 5ss

27.4

-2.6

3.2

35.6

41.2

Minor BPS

40.6

-0.7

44.78

44.2

Associated Gene:

Gene:

CASKIN1

Ensembl Gene ID:

ENSAPLG00000024608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043102

1114638 - 1130066

15429

ENSAPLT00000024626

1114638 - 1130066

15429

ENSAPLT00000017998

1114638 - 1129507

14870