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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11250878_11251269_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11250878 - 11251269

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGGT

5'SS Class:

major

3'SS Sequence:

CTTACTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TCTTTCTTACTC

Flanking Amino Acid:

LLQPTLEINTGHALIKKLNE

Intron Amino Acid Position:

579

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

67.8

43.5

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

82.8

0.74

0.8

76.2

32.3

Minor 5ss

30.5

-2.2

3.6

38.1

46.8

Minor BPS

0.48

1.6

73.1

38.8

Associated Gene:

Gene:

TRAP1

Ensembl Gene ID:

ENSAPLG00000016060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016788

11249632 - 11268120

18489