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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11251416_11251847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11251416 - 11251847

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TCAGCACTGATT

Flanking Amino Acid:

VLGSRVTDVKVTTRLDTHPA

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

78.2

0.64

0.9

73.2

37.2

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

44.6

-0.3

61.47

42.6

Associated Gene:

Gene:

TRAP1

Ensembl Gene ID:

ENSAPLG00000016060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016788

11249632 - 11268120

18489