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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11252548_11252987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11252548 - 11252987

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

TTATCGTCTACT

Flanking Amino Acid:

FEAMKKKDMEVLFCYEQFDE

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.3

39.5

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

79.4

0.66

75.8

38.1

Minor 5ss

30.6

-2.2

3.4

39.1

46.7

Minor BPS

48.5

-0

2.5

77.42

44.5

Associated Gene:

Gene:

TRAP1

Ensembl Gene ID:

ENSAPLG00000016060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016788

11249632 - 11268120

18489