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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11255325_11255612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11255325 - 11255612

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACGTGCA

5'SS Class:

major

3'SS Sequence:

CTTGTTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAC

U12 Branch Point Sequence:

CTGCTGTTACCT

Flanking Amino Acid:

IRSIFYVPEQKPSMFDISRE

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

Major BPS

59.1

0.23

1.2

52.7

42.9

Major PPT

83.1

0.74

0.8

77.4

31.4

Minor 5ss

33.6

-1.9

3.3

39.5

Minor BPS

45.4

-0.2

2.3

64.1

46.5

Associated Gene:

Gene:

TRAP1

Ensembl Gene ID:

ENSAPLG00000016060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016788

11249632 - 11268120

18489