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Intron Name: Anas_platyrhynchos_platyrhynchos_15_11259948_11260667_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11259948 - 11260667

Intron Length:

720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTTAT

U12 Branch Point Sequence:

GCTGGTTTATGT

Flanking Amino Acid:

LGTIARSGSKAFLDALQSQA

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

63.5

0.34

1.4

57.4

49.1

Major PPT

88.1

0.86

0.6

81.6

30.5

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

41.1

-0.6

2.2

55.3

47.2

Associated Gene:

Gene:

TRAP1

Ensembl Gene ID:

ENSAPLG00000016060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016788

11249632 - 11268120

18489