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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1129504_1129969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1129504 - 1129969

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

CAACCGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CCGTCCCCAACC

Flanking Amino Acid:

KIKQEDSQAADSAVESKSTG

Intron Amino Acid Position:

1519

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.1

52.4

44.9

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

60.7

0.24

0.9

50.1

38.7

Minor 5ss

29.9

-2.3

3.5

33.9

42.9

Minor BPS

-0

59.08

45.7

Associated Gene:

Gene:

CASKIN1

Ensembl Gene ID:

ENSAPLG00000024608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024626

1114638 - 1130066

15429

ENSAPLT00000043102

1114638 - 1130066

15429