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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1137227_1138314_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1137227 - 1138314

Intron Length:

1088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

AGGCGTGTGACC

Flanking Amino Acid:

FSGSSDKTIKVWDTCTTYKC

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

77.9

31.9

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

0.52

70.3

36.3

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

39.3

-0.8

2.2

45.44

37.4

Associated Gene:

Gene:

TRAF7

Ensembl Gene ID:

ENSAPLG00000007038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007359

1133237 - 1147929

14693