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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1140100_1140358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1140100 - 1140358

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCATCTCTCGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

TCTGCAGTGACC

Flanking Amino Acid:

QLEKNLELKFDVLDENQSKL

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.1

43.2

Major BPS

64.7

0.37

1.3

74.7

Major PPT

70.2

0.45

0.8

65.2

30.2

Minor 5ss

32.9

-2

42.1

44.4

Minor BPS

45.9

-0.3

2.3

62.5

43.5

Associated Gene:

Gene:

TRAF7

Ensembl Gene ID:

ENSAPLG00000007038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007359

1133237 - 1147929

14693