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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_11404512_11407572_R

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
11404512 - 11407572
Intron Length:
3061

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGAGCATC
5'SS Class:
strong_major
3'SS Sequence:
TTTTTTATTTCAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTTAT
U12 Branch Point Sequence:
TTTTTTTTATTT
Flanking Amino Acid:
ILLYISLCPDSSVETFHLDL
Intron Amino Acid Position:
938

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
87.4
0.88
0.8
81.3
32.8
Major BPS
96.5
1.15
0.6
86
34.2
Major PPT
94.3
1
0.6
93.4
22.5
Minor 5ss
38.5
-1.3
3
51.2
45.7
Minor BPS
70.5
0.72
1.5
86.8
33.5

Associated Gene:

Gene:
ADCY9
Ensembl Gene ID:
ENSAPLG00000015325
Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015986
11396500 - 11478209
81710
ENSAPLT00000047042
11396500 - 11478209
81710
ENSAPLT00000025791
11396500 - 11478209
81710